Documentation inventory · 27 August 2026
Pre-refactor snapshot. This inventories every Markdown page and notebook, including compatibility pages and unpublished examples; inclusion is not a claim that an example is validated. See the migration plan for canonical destinations, generated ownership, and retained legacy routes.
| Existing path | Page type / proposed destination | Existing title |
|---|---|---|
api/cubedynamics.md |
Documents verb / API / technical reference | cubedynamics API Reference |
api/data.md |
Documents verb / API / technical reference | Scientific nouns and source loaders |
api/index.md |
Documents verb / API / technical reference | API Reference |
api/inventory_full.md |
Documents verb / API / technical reference | Function and Class Inventory (Full / Dev) |
api/pipe.md |
Documents verb / API / technical reference | Pipe API |
api/reference.md |
Documents verb / API / technical reference | Reference and deprecated shims |
api/verbs.md |
Documents verb / API / technical reference | Verbs API |
api/viz.md |
Documents verb / API / technical reference | Visualization |
api.md |
Documents verb / API / technical reference | API reference (legacy) |
assets/README.md |
Documents verb / API / technical reference | Assets |
assets/datasets/README.md |
Documents verb / API / technical reference | Dataset preview assets |
assets/workflows/README.md |
Documents verb / API / technical reference | README |
capabilities/fire-vase.md |
Vignette / analysis collection | Fire VASE / FireHull |
capabilities/index.md |
Vignette / analysis collection | Capabilities Overview |
capabilities/textbook_verbs.md |
Vignette / analysis collection | Verb vocabulary by ownership |
capabilities.md |
Documents verb / API / technical reference | Capabilities |
captions_legends.md |
Documents verb / API / technical reference | Captions, Legends, and Scientific Storytelling |
changelog.md |
Development / About (inside Documents) | Changelog |
climate_cubes.md |
Documents verb / API / technical reference | Climate cubes |
concepts/backends.md |
Learn / concept supplement | Climate data backends |
concepts/climate_cubes.md |
Learn / concept supplement | What is a climate cube? |
concepts/core_and_projects.md |
Learn / concept supplement | Core grammar, integrations, and project verbs |
concepts/cube_math.md |
Learn / concept supplement | Climate cube math primitives |
concepts/cubes.md |
Learn / concept supplement | What is a cube? |
concepts/faceting.md |
Learn / concept supplement | Faceting: Multi-Panel Cube Figures |
concepts/glossary.md |
Learn / concept supplement | Glossary |
concepts/grammar.md |
Learn / concept supplement | Pipe verbs |
concepts/index.md |
Learn / concept supplement | Concepts Overview |
concepts/ndvi_zscore.md |
Learn / concept supplement | NDVI z-scores |
concepts/pipe_and_verbs.md |
Learn / concept supplement | Pipe syntax & verbs |
concepts/rolling_stats.md |
Learn / concept supplement | Rolling correlation & tail dependence |
concepts/semantic_grammar.md |
Learn / concept supplement | Semantic Grammar and Analysis Coaching |
concepts/synchrony_grammar.md |
Learn / concept supplement | Synchrony Grammar |
concepts/virtual_cubes.md |
Learn / concept supplement | VirtualCube |
concepts.md |
Documents verb / API / technical reference | Concepts Overview |
contributing.md |
Documents verb / API / technical reference | Contributing |
cubeplot_grammar.md |
Documents verb / API / technical reference | CubePlot Grammar of Graphics |
data/climate_weather.md |
Library noun / discovery | Climate & weather nouns |
data/index.md |
Library noun / discovery | Scientific data vocabulary |
data/phase1_qa.md |
Library noun / discovery | Phase 1 source QA |
data/surface_observation.md |
Library noun / discovery | Surface observation nouns |
datasets/citations.md |
Library source / legacy adapter | Citations |
datasets/compatibility.md |
Library source / legacy adapter | Compatibility matrix |
datasets/daymet.md |
Library source / legacy adapter | Daymet candidate status |
datasets/fired.md |
Library source / legacy adapter | FIRED (Fire Event Reconstruction and Discussion) |
datasets/gridmet.md |
Library source / legacy adapter | gridMET |
datasets/index.md |
Library source / legacy adapter | Provider-specific dataset adapters |
datasets/landsat8_mpc.md |
Library source / legacy adapter | Landsat 8 (Microsoft Planetary Computer) |
datasets/prism.md |
Library source / legacy adapter | PRISM |
datasets/sentinel2_ndvi.md |
Library source / legacy adapter | Sentinel-2 NDVI |
datasets/which_dataset.md |
Library source / legacy adapter | Which dataset should I use? |
decision_vignettes/black_hills.md |
Vignette / analysis collection | Black Hills · Growth, Fire, and Extraction |
decision_vignettes/communities.md |
Vignette / analysis collection | Communities · Who and What Is Exposed? |
decision_vignettes/habitat_squeeze.md |
Vignette / analysis collection | Habitat Squeeze · Conservation Under Multiple Pressures |
decision_vignettes/index.md |
Vignette / analysis collection | index |
decision_vignettes/missouri_water.md |
Vignette / analysis collection | Missouri & Watersheds · Water in a Changing Landscape |
decision_vignettes/validation.md |
Vignette / analysis collection | Decision Lab Validation |
decision_vignettes/wildcard.md |
Vignette / analysis collection | What Should South Dakota Know? |
decision_vignettes/working_lands.ipynb |
Vignette / analysis collection | Working Lands · Read hot-and-dry weather as two nouns |
design/spatial_dataset_contract.md |
Development / About (inside Documents) | Spatial & CRS Dataset Contract |
design_philosophy.md |
Documents verb / API / technical reference | Design Philosophy: Streaming + Grammar + Scientific Defaults |
dev/changelog.md |
Development / About (inside Documents) | Changelog |
dev/ci_testing.md |
Development / About (inside Documents) | CI and Testing |
dev/contributing.md |
Development / About (inside Documents) | Contributing |
dev/cube_viewer_invariants.md |
Development / About (inside Documents) | Cube viewer invariants |
dev/figure_backend.md |
Development / About (inside Documents) | Figure backend (v.plot) |
dev/fire_plot_architecture.md |
Development / About (inside Documents) | Fire plot architecture and migration path |
dev/fire_vase_lakehouse.md |
Development / About (inside Documents) | Fire VASE Lakehouse Architecture |
dev/legacy_reference.md |
Development / About (inside Documents) | Legacy reference |
dev/roadmap.md |
Development / About (inside Documents) | Roadmap |
dev/source_lifecycle.md |
Development / About (inside Documents) | Source lifecycle, revisions, and certification |
dev/testing_recon.md |
Development / About (inside Documents) | Testing reconstruction & QA patterns |
dev/viewer_backend.md |
Development / About (inside Documents) | Viewer backend: how the HTML cube is built |
developer/fire_vase_status.md |
Development / About (inside Documents) | Fire / VASE Status Audit |
development.md |
Documents verb / API / technical reference | Development |
documentation/index.md |
Documents verb / API / technical reference | index |
examples/climate_ndvi_correlation.md |
Vignette / analysis collection | Climate–NDVI correlation cube |
examples/gridmet_aoi_variance.md |
Vignette / analysis collection | gridMET AOI variance |
examples/landsat8_mpc.md |
Vignette / analysis collection | Landsat-8 streaming from Microsoft Planetary Computer |
examples/ndvi_cube_viewer.md |
Vignette / analysis collection | NDVI cube viewer in notebooks |
examples/prism_jja_variance.md |
Vignette / analysis collection | PRISM JJA variance |
examples/s2_ndvi_zscore.md |
Vignette / analysis collection | Sentinel-2 NDVI z-score cube |
examples_gallery.md |
Vignette / analysis collection | Examples Gallery |
extending/custom_nouns.md |
Documents verb / API / technical reference | Make a custom noun |
extending/custom_verbs.md |
Documents verb / API / technical reference | Write a custom verb project |
function_inventory.md |
Documents verb / API / technical reference | Function Inventory (User-facing) |
getting_started/first_prism_cube.md |
Learn / concept supplement | First cube (PRISM) |
getting_started/install.md |
Learn / concept supplement | Installation & setup |
getting_started.md |
Documents verb / API / technical reference | Getting started with CubeDynamics |
grammar/index.md |
Documents verb / API / technical reference | Grammar of Streaming |
grammar/lazy_evaluation.md |
Documents verb / API / technical reference | Lazy Evaluation |
grammar/workflow_composition.md |
Documents verb / API / technical reference | Workflow Composition |
howto/biological_cubes_and_coupling.md |
Vignette / analysis collection | Biological Cubes and Coupling |
howto/build_state_cubes.md |
Vignette / analysis collection | Build State Cubes |
howto/climate_variance.md |
Vignette / analysis collection | Climate variance |
howto/correlation_cubes.md |
Vignette / analysis collection | Correlation & synchrony cubes |
howto/four_types_of_synchrony.md |
Vignette / analysis collection | Four Types of Synchrony |
howto/index.md |
Vignette / analysis collection | How-to Guides |
howto/ndvi_anomalies.md |
Vignette / analysis collection | NDVI anomalies |
index.md |
Home | index |
legacy/internal_notes/streaming_renderer.md |
Documents verb / API / technical reference | Streaming-First Rendering & Huge Data |
legacy/internal_notes/viewer_debug_notes.md |
Documents verb / API / technical reference | Viewer debug notes |
legacy/vase-volumes.md |
Documents verb / API / technical reference | Vase Volumes & Arbitrary 3-D Subsets |
lexcube.md |
Documents verb / API / technical reference | Lexcube integration |
library/index.md |
Library noun / discovery | index |
manuscripts/fire_vase_developmental_morphology/ai_transparency_statement.md |
Documents verb / API / technical reference | AI Transparency Statement |
manuscripts/fire_vase_developmental_morphology/citation_audit_2026-07-22.md |
Documents verb / API / technical reference | Citation Audit |
manuscripts/fire_vase_developmental_morphology/climate_revision_science_citation_audit_2026-07-22.md |
Documents verb / API / technical reference | Climate Revision Science-Style Citation Audit |
manuscripts/fire_vase_developmental_morphology/climate_revision_science_compliance_2026-07-22.md |
Documents verb / API / technical reference | Climate Revision Science-Style Compliance Pass |
manuscripts/fire_vase_developmental_morphology/final_citation_check_2026-07-23.md |
Documents verb / API / technical reference | Final Citation Check |
manuscripts/fire_vase_developmental_morphology/formal_reviews_climate_revision_round_2.md |
Documents verb / API / technical reference | Formal Reviews: Climate Revision Round 2 |
manuscripts/fire_vase_developmental_morphology/formal_reviews_climate_revision_round_3.md |
Documents verb / API / technical reference | Formal Reviews: Climate Revision Round 3 |
manuscripts/fire_vase_developmental_morphology/formal_reviews_round_1.md |
Documents verb / API / technical reference | Formal Reviews - Round 1 |
manuscripts/fire_vase_developmental_morphology/formal_reviews_round_2.md |
Documents verb / API / technical reference | Formal Reviews Round 2 |
manuscripts/fire_vase_developmental_morphology/formal_reviews_round_3.md |
Documents verb / API / technical reference | Formal Reviews Round 3 |
manuscripts/fire_vase_developmental_morphology/manuscript_audited_revision.md |
Documents verb / API / technical reference | Fire VASE Provides a Low-Dimensional Coordinate System for Wildfire Development |
manuscripts/fire_vase_developmental_morphology/manuscript_climate_revision.md |
Documents verb / API / technical reference | Climate Organizes but Does Not Determine Wildfire Development |
manuscripts/fire_vase_developmental_morphology/manuscript_climate_revision_science_style.md |
Documents verb / API / technical reference | Climate Organizes but Does Not Determine Wildfire Development |
manuscripts/fire_vase_developmental_morphology/manuscript_stage_1_narrative.md |
Documents verb / API / technical reference | Fire VASE Developmental Morphology Manuscript - Stage 1 Narrative Draft |
manuscripts/fire_vase_developmental_morphology/manuscript_stage_2_citation_revised_narrative.md |
Documents verb / API / technical reference | Fire VASE Developmental Morphology Manuscript - Stage 2 |
manuscripts/fire_vase_developmental_morphology/science_author_guidelines_compliance.md |
Documents verb / API / technical reference | Science Author-Guideline Compliance Pass |
methods_and_citation.md |
Documents verb / API / technical reference | Methods & Citation |
ops_io.md |
Documents verb / API / technical reference | Operations – IO verbs |
ops_stats.md |
Documents verb / API / technical reference | Statistics verbs |
ops_transforms.md |
Documents verb / API / technical reference | Transform verbs |
overview.md |
Documents verb / API / technical reference | Documentation Overview |
pipe_syntax.md |
Documents verb / API / technical reference | Pipe Syntax & Verbs |
pipe_verbs.md |
Documents verb / API / technical reference | Pipe verbs |
project/data_vocabulary_plan.md |
Development / About (inside Documents) | Scientific data vocabulary: audit and phased publication plan |
project/deprecation_inventory.md |
Development / About (inside Documents) | Deprecation & Legacy Inventory |
project/documentation_refactor.md |
Development / About (inside Documents) | Documentation structure and migration |
project/grammar_inventory.md |
Development / About (inside Documents) | Grammar Inventory |
project/public_api.md |
Development / About (inside Documents) | Public API & Scope |
project/publication_plan.md |
Development / About (inside Documents) | Publication-readiness audit and plan |
project/scope.md |
Development / About (inside Documents) | Project Scope |
project/site_analytics_seo.md |
Development / About (inside Documents) | Site analytics and SEO |
project/synchrony_roadmap.md |
Development / About (inside Documents) | Synchrony Roadmap |
projects/index.md |
Vignette / analysis collection | Projects built with the grammar |
quickstart.md |
Learn / concept supplement | quickstart |
reading_paths.md |
Learn / concept supplement | Reading Paths |
recipes/climate_tail_dep_center.md |
Vignette / analysis collection | Rolling climate synchrony vs center pixel |
recipes/cube_math_primitives.md |
Vignette / analysis collection | Climate cube math primitives: temporal + spatial operators |
recipes/fire_event_vase_hull.md |
Vignette / analysis collection | Fire event vase + climate merge (fire_plot) |
recipes/fire_vase_synthetic.md |
Vignette / analysis collection | Synthetic FireHull Recipe |
recipes/ghosh_tail_association.md |
Vignette / analysis collection | Ghosh-Style Tail Association for Climate Synchrony |
recipes/gridmet_variance_cube.md |
Vignette / analysis collection | GRIDMET variance / z-score cube |
recipes/index.md |
Vignette / analysis collection | Recipes Overview |
recipes/prism_variance_cube.md |
Vignette / analysis collection | PRISM precipitation anomaly / z-score cube |
recipes/recipe_template.md |
Vignette / analysis collection | Recipe structure upgrade |
recipes/s2_corr_center.md |
Vignette / analysis collection | Rolling correlation cube vs center pixel (Sentinel-2 NDVI z-scores) |
recipes/s2_ndvi_zcube.md |
Vignette / analysis collection | Sentinel-2 NDVI z-score cube + Lexcube |
recipes/s2_tail_dep_center.md |
Vignette / analysis collection | Rolling tail-dependence cubes vs center pixel (Sentinel-2 NDVI z-scores) |
recipes/s2_tail_dep_manual.md |
Vignette / analysis collection | Sentinel-2 → NDVI z-score cube → rolling-window tail-dependence vs center pixel → Lexcube |
recipes/spatial_synchrony_units.md |
Vignette / analysis collection | Spatial synchrony blocks |
reference/verbs_io.md |
Documents verb / API / technical reference | IO verbs |
reference/verbs_models.md |
Documents verb / API / technical reference | Models (coming soon) |
reference/verbs_stats.md |
Documents verb / API / technical reference | Stats verbs |
reference/verbs_synchrony.md |
Documents verb / API / technical reference | Synchrony Verbs |
reference/verbs_transforms.md |
Documents verb / API / technical reference | Transform verbs |
reference/verbs_viz.md |
Documents verb / API / technical reference | Visualization verbs |
related/related_work.md |
Development / About (inside Documents) | Related work & ecosystem |
semantic_variables.md |
Documents verb / API / technical reference | Semantic variable loaders |
start_here.md |
Learn / concept supplement | Start Here |
streaming/cloud_sources.md |
Documents verb / API / technical reference | Cloud Sources |
streaming/index.md |
Documents verb / API / technical reference | Streaming Environmental Data |
streaming/local_sources.md |
Documents verb / API / technical reference | Local Sources |
streaming/stac_sources.md |
Documents verb / API / technical reference | STAC Sources |
streaming/what_is_streaming.md |
Documents verb / API / technical reference | What Is Streaming? |
streaming_large_data.md |
Documents verb / API / technical reference | Streaming large data |
streaming_renderer.md |
Documents verb / API / technical reference | Streaming renderer (deprecated path) |
streaming_sources.md |
Documents verb / API / technical reference | Streaming PRISM & gridMET |
synchrony/biology_coupling.md |
Vignette / analysis collection | Biological Cubes and Coupling |
synchrony/center_recipe.md |
Vignette / analysis collection | Center-Pixel Climate Recipe |
synchrony/index.md |
Vignette / analysis collection | Synchrony |
synchrony/primitives.md |
Vignette / analysis collection | Four Synchrony Primitives |
synchrony/roadmap.md |
Vignette / analysis collection | Roadmap and Validation |
synchrony/state_events.md |
Vignette / analysis collection | State Cubes and Events |
synchrony/theory.md |
Vignette / analysis collection | Theory Map |
tubes.md |
Documents verb / API / technical reference | Suitability tubes |
updates.md |
Documents verb / API / technical reference | Changelog |
validation/contrast.md |
Documents verb / API / technical reference | Expected-failure controls |
validation/cube.md |
Documents verb / API / technical reference | Cube / HTML validation |
validation/data.md |
Documents verb / API / technical reference | Real-data validation |
validation/index.md |
Documents verb / API / technical reference | Validation |
validation/methods.md |
Documents verb / API / technical reference | Validation methods |
vase-volumes.md |
Documents verb / API / technical reference | Vase volumes (legacy path) |
vase_volumes.md |
Documents verb / API / technical reference | Vase Volumes: Streaming 3-D Subsets |
verbs/index.md |
Documents verb / API / technical reference | Verbs |
verbs/landsat8_mpc.md |
Documents verb / API / technical reference | landsat8_mpc |
viewer_debug_notes.md |
Documents verb / API / technical reference | Viewer debug notes (deprecated path) |
viewers.md |
Documents verb / API / technical reference | Cube viewers |
vignette_minimal_ndvi.md |
Documents verb / API / technical reference | Minimal vignette (legacy link) |
vignettes/cube_from_arrays.ipynb |
Vignette / analysis collection | 01 · From an array to a scientific cube |
vignettes/cube_from_dataset.ipynb |
Vignette / analysis collection | 03 · Two variables, two questions |
vignettes/cube_from_tidy_table.ipynb |
Vignette / analysis collection | 02 · From observations to a comparable signal |
vignettes/custom_verb_project.ipynb |
Vignette / analysis collection | 07 · Build a project-owned verb |
vignettes/grammar_basics.ipynb |
Vignette / analysis collection | 04 · Read the analysis from left to right |
vignettes/index.md |
Vignette / analysis collection | index |
vignettes/lazy_composition.ipynb |
Vignette / analysis collection | 08 · Stay lazy until the answer is requested |
vignettes/states_and_events.ipynb |
Vignette / analysis collection | 06 · From cold observations to event evidence |
vignettes/verbs_gallery.ipynb |
Vignette / analysis collection | 05 · One cube, six analytical views |
viz/cube_viewer.md |
Documents verb / API / technical reference | Interactive cube viewer (v.plot) |
viz/index.md |
Documents verb / API / technical reference | Visualization Overview |
viz/maps.md |
Documents verb / API / technical reference | Maps (v.map) |
viz/suitability_tubes.md |
Documents verb / API / technical reference | Suitability tubes |
why_cubedynamics.md |
Learn / concept supplement | Why CubeDynamics? |
why_not_xarray.md |
Documents verb / API / technical reference | Why CubeDynamics Exists (Even If You Use xarray) |
workflows/climate_analysis.md |
Vignette / analysis collection | Climate Analysis |
workflows/fire_analysis.md |
Vignette / analysis collection | Fire Analysis |
workflows/fire_vase_developmental_morphology.md |
Vignette / analysis collection | Fire VASE Developmental Morphology |
workflows/index.md |
Vignette / analysis collection | Workflows |
workflows/remote_sensing_analysis.md |
Vignette / analysis collection | Remote Sensing Analysis |
workflows/vegetation_analysis.md |
Vignette / analysis collection | Vegetation Analysis |