Documents · Reference directory
CubeDynamics overview manuscript
CubeDynamics: An Inspectable Grammar for Environmental Data Analysis
These are manuscript archive snapshots, not the canonical software reference. Follow the reviewer path for current behavior and evidence.
Current collection received 12 October 2026
| Document | Contents | Download |
|---|---|---|
| Current main manuscript | 22 pages, including conceptual figures and full references | Download main manuscript |
| Current supplementary information | 35 pages of contracts, source records, protocol, evidence boundaries and references | Download SI |
These originals are preserved exactly as supplied. Their evidence boundary remains September 25, 2026; the intake date does not update their validation. The section-by-section content map links all numbered sections, tables, and figures to website documentation homes. The supplied JOSS Markdown, bibliography, and collaborator Word copy are retained in the dated repository collection.
097fee854d610328201b0d186121f1fd435326a4a69de6920e8bd51c078f35b4 main-39.pdf
384cb4bf605d7d48b45cd8b67dfcc67aacb0f2f26bcafc2cda4ced246352d0b1 supplement-11.pdf
Earlier collection retained for history
The earlier package-wide manuscript explains the motivation, design, evidence, and limits of CubeDynamics as an inspectable grammar for environmental data analysis. It describes source-qualified nouns, named transformations, authored order, semantic state and trace, ordinary scientific Python objects, validation, extension boundaries, and the distinction between computational repeatability and scientific inspectability.
| Document | Contents | Download |
|---|---|---|
| Overview manuscript | 19 pages: motivation, related systems, grammar design, worked example, semantic validation, discussion, conclusions, availability, and references | Download the overview manuscript (PDF, 247 KB) |
| Supplementary information | 33 pages: version boundaries, architecture, contracts, source inventory, QA evidence, vignette records, validation, extension status, reproduction commands, and claim-to-evidence tables | Download the supplement (PDF, 314 KB) |
Both documents are dated 25 September 2026. They are preserved here exactly as supplied; no pages, figures, metadata, or manuscript content were changed for website publication.
Scope and version boundary
The manuscript discusses the public 0.1.0rc3 candidate and explicitly
separated repository evidence available on 25 September 2026. The public
artifact, the later repository state, and any future final release are distinct
software states. The manuscript does not make the mutable development checkout
part of the published release retroactively.
The PDFs are dated scholarly products, not live API specifications. The
installed runtime, tests, generated callable references, public API contract,
and exact Git identity remain the sources of truth for current software behavior.
Use cubedynamics.version_info() to
identify the code actually imported by an analysis.
Reading paths
- Scientific inspectability presents the central argument as website documentation.
- Learn turns the grammar into a guided sequence.
- Public API and stability records current callable and maturity boundaries.
- Methods and citation gives concise reporting and citation guidance.
- Vignettes provide supported executable examples on reviewed observational data.
File identity
The retained SHA-256 checksums are:
9980f5aaa83f3e38a72ea0d350a9675b3a22a54fc15f027ca02885c6d048adbf overview manuscript
ea8c3ea03ddf69c799b638f38e8f9f1b2211ab55b24db3e86decaca93831d09f supplementary information